Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015844052.1_cds_XP_016508902.1_21877
CDS Infomation

[gene=LOC107826435] [db_xref=GeneID:107826435] [protein=AUGMIN subunit 6-like] [partial=3'] [protein_id=XP_016508902.1] [location=join(5948..6163,6246..6302,6744..6838,8207..8357,8791..8916,9033..9189,9545..9605,9680..9977,10452..10577,10846..11007,11096..11351,11429..>11762)] [gbkey=CDS]
Sequence

ATGACGATGGACAGAGAGAAGGAGAGGGAGATAGAGTTAGAGAGTGCAATGTACACTAAC
TGTTTGTTACTAGGTCTGGATCCATCTATCATTGGAATCGGAGCTAACAATGGCACTCCT
CGTGTTGGACTTTTTCGTCATTCAAACCCTAAATTGGGAGAACAGCTTCTTTACTTCTTA
CTTTCTTCTCTTAGAGGCCCTGCTCAATCCGCGAAGGATTTCGATAAGGTCTGGCCTATA
TTTGATTCAGCTCAATCTCGTGATTTTCGAAAGGTTGTGCAAGGAATTATAAGCGAGTTG
GAATCCCAGGGGGCACTTCCTAGAAGCAATTCGAGGGTCTCATCTCTTGCGACGTGTTGT
GGACCGAGATTTGTTGAACTTCTGTGGCAACTCTCACTGCATGCCTTGAGGGAAGTTCAT
AGGCGAACATTTGCTGCTGATGTAGCTTCTAACCCGTTACCTGCTTCATTGACAGATGTA
GCTTTCTCACATGCAGCCACCTTACTTCCTGTAACCAAGGCTAGGATTGCTCTTGAAAGA
AGAAGGTTTCTGAAAAATGCAGAAACAGCAGTTCAAAGACAGGCCACATGGTCTAATTTG
GCTCATGAGATGACAGCTGAGTTTCGAGGCCTTTGTGCTGAAGAGGCTTATTTGCAGCAA
GAACTTGAAAAACTGCATGATGTTAGAAACAAAGTAAAGTTGGAAGGTGAACTGTGGGAT
GAACTTGTATCAAGCTCGAGCCAAAACTCACATATGGTCCAAAGAGCTACTCGCTTGTGG
GACTCTTTGCTATCTCGCCAAACTCAGCACGAGATTCTCGCTTCTGGCCCAATAGAGGAT
CTTATAGCTCATCGTGAGCATAGGTATCGTATATCTGGGTCAGCTTTGCTTGCAGCCATG
GATCAAAGTTCTGTAGCTCCACCTCGTGATTTAGTTCCATCACATCTAGATAATAAAGAT
CAATCTGAAAGATCACAAGCAGATTTTGATAGAGAAAAGCGTGTGAACAATCCAGATTCT
TCTCATACTCAAGCAAATGATGAGAGTTTTTCTCGAGTTGATGAAAGGACTGCAAGAGCC
CATCCAACTATTGATATAGCTGAAGTTTTGAGGCGTTGGACACATGCCCTACAACGAATT
CATAAGCAGTCACTTCAATTGGTAAAAGTAAATGACGGAGAGGGTCCAGAGCTTCTGAGA
AGTTCACATGATGGTGGTACAAGCAGTCACGCGGAATCCTTGGCTGCAACACTTGCTGAA
CATAGGCAGCACCTAGCAAGTATACAGGTGCTCATAAATCAACTGAAGGAAGTTGCTCCA
GCTATAAAGAATTCAATTACGGAGCTGACGGAAGAAGTTGATAGTATTTCGTCCGGTCTT
CTCCCTATGGCCACGCATCATGCTGGATCACATTCACTGGTCCAAGCACAGAATAGCAGA
ACGATATCGGAGAACAGCACTGATGAGATAGCTGAGATGACCTCAAAAATGTCATCCATG
CATTTTGAAAAGGCATCAGCTACAGCCAGTCCCCCTGCTTTAAAGCTCCCACCTTTGTTT
AGTTTAACACCAAATTCTTCTGGAAAAGGTGGGAACATGCAGAAGCGGCAGGTCTCAGCT
CAAACCAGCCAAATAGAAAATCTGCATGAGAAAAAATCTCCAGATCTGCCAATTTCAAAT
AATTCAATGGATAATCTGCGACAAGCAGATGATGACCTTAGCTTTGTCCAAAATTTGAAG
AGATCCGTCAGAGAAGCTGCACTTTCCTCCCAATCTTACTATCCAGAATCATCTCAAGAT
AGTCGTTCTGATGATAGCTCTGAGCACTATTTCATACCTGTACCCGGGGTTGGGTTTCCT
CATCTTGGTAGCAAACCAAACTTATTGAGAAGTAAAAAGCTGCTCGCGTCTGAACCAGAT
TCATCTTTTTATGGGAACCATCTTCCACAAAGTCATGTGGGCATCAAGTCAGATGGACTT
CTTGACTTATTTAATGATCTGCGGTCTCTTGATGACTATGATGGCATAGATAGTTTTCT

Peptide Sequence

PEP ID

XP_016508902.1
PEP Infomation

PREDICTED: AUGMIN subunit 6-like, partial [Nicotiana tabacum]
Sequence

MTMDREKEREIELESAMYTNCLLLGLDPSIIGIGANNGTPRVGLFRHSNPKLGEQLLYFL
LSSLRGPAQSAKDFDKVWPIFDSAQSRDFRKVVQGIISELESQGALPRSNSRVSSLATCC
GPRFVELLWQLSLHALREVHRRTFAADVASNPLPASLTDVAFSHAATLLPVTKARIALER
RRFLKNAETAVQRQATWSNLAHEMTAEFRGLCAEEAYLQQELEKLHDVRNKVKLEGELWD
ELVSSSSQNSHMVQRATRLWDSLLSRQTQHEILASGPIEDLIAHREHRYRISGSALLAAM
DQSSVAPPRDLVPSHLDNKDQSERSQADFDREKRVNNPDSSHTQANDESFSRVDERTARA
HPTIDIAEVLRRWTHALQRIHKQSLQLVKVNDGEGPELLRSSHDGGTSSHAESLAATLAE
HRQHLASIQVLINQLKEVAPAIKNSITELTEEVDSISSGLLPMATHHAGSHSLVQAQNSR
TISENSTDEIAEMTSKMSSMHFEKASATASPPALKLPPLFSLTPNSSGKGGNMQKRQVSA
QTSQIENLHEKKSPDLPISNNSMDNLRQADDDLSFVQNLKRSVREAALSSQSYYPESSQD
SRSDDSSEHYFIPVPGVGFPHLGSKPNLLRSKKLLASEPDSSFYGNHLPQSHVGIKSDGL
LDLFNDLRSLDDYDGIDSFL

Transcript Sequence

Gene sequence data has not been registered.